DatasetSet_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus_repos
Phenotypephenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetNCI_ATYPICAL NF-KAPPAB PATHWAY
Enrichment Score (ES)-0.75811553
Normalized Enrichment Score (NES)-1.6176624
Nominal p-value0.0140280565
FDR q-value0.21120368
FWER p-Value0.976
Table: GSEA Results Summary



Fig 1: Enrichment plot: NCI_ATYPICAL NF-KAPPAB PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)		GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MAPK141416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at20790.612-0.0356No
2PIK3CA1423144_at 1429434_at 1429435_x_at 1440054_at 1453134_at 1460326_at27750.456-0.0231No
3REL1420710_at14232-0.005-0.5452No
4SRC1423240_at 1450918_s_at14992-0.030-0.5770No
5SYK1418261_at 1418262_at 1425797_a_at 1457239_at16497-0.099-0.6360No
6NFKB11427705_a_at 1442949_at16630-0.107-0.6317No
7RELA1419536_a_at19403-0.485-0.7111Yes
8PIK3R11425514_at 1425515_at 1438682_at 1444591_at 1451737_at19644-0.549-0.6690Yes
9LCK1425396_a_at 1439145_at 1439146_s_at 1457917_at19798-0.593-0.6186Yes
10FBXW111425461_at 1425462_at 1437468_x_at 1438336_at 1443010_at 1447294_at 1457485_at19839-0.606-0.5617Yes
11ARRB21426239_s_at 1451987_at20060-0.681-0.5058Yes
12BCL31418133_at21029-1.282-0.4258Yes
13NFKBIA1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at21592-2.242-0.2344Yes
14IKBKB1426207_at 1426333_a_at 1432275_at 1445141_at 1454184_a_at21683-2.5830.0115Yes
Table: GSEA details [plain text format]



Fig 2: NCI_ATYPICAL NF-KAPPAB PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NCI_ATYPICAL NF-KAPPAB PATHWAY: Random ES distribution   
Gene set null distribution of ES for NCI_ATYPICAL NF-KAPPAB PATHWAY